Package: MsStash 0.97.0

Johannes Rainer

MsStash: Infrastructure to serialize and restore mass spectrometry data objects

The serialization mechanism of R allows to save and load R data objects in a binary format, that can however not be read by other programming languages or software. The MsStash package defines classes and method to enable serializing and restoring, or importing, mass spectrometry data objects to and from language agnostic file formats. A variety of different file types, including HDF5 and JSON-based formats defined by the Bioconductor *alabaster* package are supported. The file type can be defined and configured through a second argument `param` of the save/read methods.

Authors:Johannes Rainer [aut, cre], Philippine Louail [aut], Laurent Gatto [ctb]

MsStash_0.97.0.tar.gz
MsStash_0.97.0.zip(r-4.7)MsStash_0.97.0.zip(r-4.6)
MsStash_0.97.0.tgz(r-4.6-any)
MsStash_0.97.0.tar.gz(r-4.7-any)MsStash_0.97.0.tar.gz(r-4.6-any)
MsStash_0.97.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MsStash/json (API)

# Install 'MsStash' in R:
install.packages('MsStash', repos = c('https://rformassspectrometry.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/msstash/issues

On CRAN:

Conda:

infrastructuremassspectrometrymetabolomicsdataimportproteomics

3.00 score 4 exports 1 dependencies

Last updated from:633c0cb656. Checks:7 OK, 2 FAIL. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK171
source / vignettesOK247
linux-release-x86_64OK128
macos-release-arm64OK91
macos-oldrel-arm64FAIL108
windows-develOK80
windows-releaseOK74
windows-oldrelFAIL153
wasm-releaseOK106

Exports:AlabasterParamPlainTextParamreadMsObjectsaveMsObject

Dependencies:ProtGenerics

Storage Modes of MS Data Objects

Rendered fromMsStash.Rmdusingknitr::rmarkdownon May 12 2026.

Last update: 2026-05-12
Started: 2026-04-24