{
  "_id": "6a1f37dbb401979e73428d94",
  "Package": "MsStash",
  "Title": "Infrastructure to serialize and restore mass spectrometry data\nobjects",
  "Version": "0.97.0",
  "Authors@R": "c(person(given = \"Johannes\", family = \"Rainer\",\nemail = \"Johannes.Rainer@eurac.edu\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-6977-7147\")),\nperson(given = \"Philippine\", family = \"Louail\",\nemail = \"philippine.louail@eurac.edu\",\nrole = \"aut\",\ncomment = c(ORCID = \"0009-0007-5429-6846\")),\nperson(given = \"Laurent\", family = \"Gatto\",\nemail = \"laurent.gatto@uclouvain.be\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0002-1520-2268\")))",
  "Description": "The serialization mechanism of R allows to save and load R\ndata objects in a binary format, that can however not be read\nby other programming languages or software. The MsStash package\ndefines classes and method to enable serializing and restoring,\nor importing, mass spectrometry data objects to and from\nlanguage agnostic file formats. A variety of different file\ntypes, including HDF5 and JSON-based formats defined by the\nBioconductor *alabaster* package are supported. The file type\ncan be defined and configured through a second argument `param`\nof the save/read methods.",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/RforMassSpectrometry/MsStash/issues",
  "URL": "https://github.com/RforMassSpectrometry/MsStash",
  "biocViews": "Infrastructure, MassSpectrometry, Metabolomics, DataImport,\nProteomics",
  "Roxygen": "list(markdown=TRUE)",
  "RoxygenNote": "7.3.3",
  "Collate": "'PlainTextParam.R' 'AlabasterParam.R' 'AllGenerics.R'",
  "Repository": "https://rformassspectrometry.r-universe.dev",
  "Date/Publication": "2026-05-12 09:16:11 UTC",
  "RemoteUrl": "https://github.com/rformassspectrometry/MsStash",
  "RemoteRef": "HEAD",
  "RemoteSha": "633c0cb656271924e11f59ca708326cbed04962d",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-12 11:24:03 UTC",
    "User": "root"
  },
  "Author": "Johannes Rainer [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-6977-7147>),\nPhilippine Louail [aut] (ORCID:\n<https://orcid.org/0009-0007-5429-6846>),\nLaurent Gatto [ctb] (ORCID: <https://orcid.org/0000-0002-1520-2268>)",
  "Maintainer": "Johannes Rainer <Johannes.Rainer@eurac.edu>",
  "MD5sum": "5dd890abf8d9c2bfff638dee13798407",
  "_user": "rformassspectrometry",
  "_type": "src",
  "_file": "MsStash_0.97.0.tar.gz",
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  "_created": "2026-05-12T11:24:03.000Z",
  "_published": "2026-06-02T20:06:51.223Z",
  "_distro": "noble",
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    "author": "Johannes Rainer <5506112+jorainer@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #4 from rformassspectrometry/jomain\n\ndocs: complete vignette and unit tests",
    "time": 1778577371
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  "_maintainer": {
    "name": "Johannes Rainer",
    "email": "johannes.rainer@eurac.edu",
    "login": "jorainer",
    "mastodon": "@jorainer@fediscience.org",
    "bluesky": "@jorainer.bsky.social",
    "linkedin": "in/jorainer",
    "orcid": "0000-0002-6977-7147",
    "uuid": 5506112
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  "_dependencies": [
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      "package": "R",
      "version": ">= 4.6.0",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "ProtGenerics",
      "role": "Imports"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "alabaster.base",
      "role": "Suggests"
    },
    {
      "package": "fs",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
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  "_owner": "rformassspectrometry",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-17",
      "n": 4
    },
    {
      "week": "2026-20",
      "n": 1
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  ],
  "_tags": [],
  "_topics": [
    "infrastructure",
    "massspectrometry",
    "metabolomics",
    "dataimport",
    "proteomics"
  ],
  "_stars": 0,
  "_contributors": [
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    "name": "RforMassSpectrometry",
    "description": "R packages for mass spectrometry"
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  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
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    "extra/readme.md",
    "manual.pdf"
  ],
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  "_exports": [
    "AlabasterParam",
    "PlainTextParam",
    "readMsObject",
    "saveMsObject"
  ],
  "_help": [
    {
      "page": "AlabasterParam",
      "title": "Store MS data objects using the alabaster framework",
      "concept": [
        "MS object export and import formats."
      ],
      "topics": [
        "AlabasterParam",
        "AlabasterParam-class"
      ]
    },
    {
      "page": "PlainTextParam",
      "title": "Store contents of MS objects as plain text files",
      "concept": [
        "MS object export and import formats."
      ],
      "topics": [
        "PlainTextParam",
        "PlainTextParam-class"
      ]
    },
    {
      "page": "saveMsObject",
      "title": "Save and load MS data objects to and from different file formats",
      "topics": [
        "readMsObject",
        "saveMsObject"
      ]
    }
  ],
  "_readme": "https://github.com/rformassspectrometry/MsStash/raw/HEAD/README.md",
  "_rundeps": [
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  ],
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      "source": "MsStash.Rmd",
      "filename": "MsStash.html",
      "title": "Storage Modes of MS Data Objects",
      "engine": "knitr::rmarkdown",
      "headings": [
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        "Installation",
        "Example implementations",
        "Suggested properties of implemented methods",
        "PlainTextParam",
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        "Session information"
      ],
      "created": "2026-04-24 12:51:32",
      "modified": "2026-05-12 09:16:11",
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  ],
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  "_nocasepkg": "msstash",
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