Package: MsBackendMsp 1.9.0
MsBackendMsp: Mass Spectrometry Data Backend for NIST msp Files
Mass spectrometry (MS) data backend supporting import and handling of MS/MS spectra from NIST MSP Format (msp) files. Import of data from files with different MSP *flavours* is supported. Objects from this package add support for MSP files to Bioconductor's Spectra package. This package is thus not supposed to be used without the Spectra package that provides a complete infrastructure for MS data handling.
Authors:
MsBackendMsp_1.9.0.tar.gz
MsBackendMsp_1.9.0.zip(r-4.5)MsBackendMsp_1.9.0.zip(r-4.4)MsBackendMsp_1.9.0.zip(r-4.3)
MsBackendMsp_1.9.0.tgz(r-4.4-any)MsBackendMsp_1.9.0.tgz(r-4.3-any)
MsBackendMsp_1.9.0.tar.gz(r-4.5-noble)MsBackendMsp_1.9.0.tar.gz(r-4.4-noble)
MsBackendMsp_1.9.0.tgz(r-4.4-emscripten)MsBackendMsp_1.9.0.tgz(r-4.3-emscripten)
MsBackendMsp.pdf |MsBackendMsp.html✨
MsBackendMsp/json (API)
NEWS
# Install 'MsBackendMsp' in R: |
install.packages('MsBackendMsp', repos = c('https://rformassspectrometry.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rformassspectrometry/msbackendmsp/issues
On BioConductor:MsBackendMsp-1.9.0(bioc 3.20)MsBackendMsp-1.8.0(bioc 3.19)
infrastructureproteomicsmassspectrometrymetabolomicsdataimportmass-spectrometry
Last updated 7 months agofrom:ebb4196f97. Checks:OK: 5 NOTE: 2. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 27 2024 |
R-4.5-win | NOTE | Oct 27 2024 |
R-4.5-linux | NOTE | Oct 27 2024 |
R-4.4-win | OK | Oct 27 2024 |
R-4.4-mac | OK | Oct 27 2024 |
R-4.3-win | OK | Oct 27 2024 |
R-4.3-mac | OK | Oct 27 2024 |
Exports:backendInitializeexportMsBackendMspreadMspspectraVariableMapping
Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11formatRfsfutile.loggerfutile.optionsIRangeslambda.rMASSMetaboCoreUtilsMsCoreUtilsProtGenericsRcppS4VectorssnowSpectra
Readme and manuals
Help Manual
Help page | Topics |
---|---|
MS data backend for msp files | backendInitialize,MsBackendMsp-method export,MsBackendMsp-method MsBackendMsp MsBackendMsp-class spectraVariableMapping,MsBackendMsp-method |
Reading MSP files | readMsp |