This package is considered a duplicate. The official version of this package is found at:https://bioc.r-universe.dev/MsBackendMsp

Package: MsBackendMsp 1.15.1

Johannes Rainer

MsBackendMsp: Mass Spectrometry Data Backend for NIST msp Files

Mass spectrometry (MS) data backend supporting import and handling of MS/MS spectra from NIST MSP Format (msp) files. Import of data from files with different MSP *flavours* is supported. Objects from this package add support for MSP files to Bioconductor's Spectra package. This package is thus not supposed to be used without the Spectra package that provides a complete infrastructure for MS data handling.

Authors:Neumann Steffen [aut], Johannes Rainer [aut, cre], Michael Witting [ctb]

MsBackendMsp_1.15.1.tar.gz
MsBackendMsp_1.15.1.zip(r-4.7)MsBackendMsp_1.15.1.zip(r-4.6)MsBackendMsp_1.15.1.zip(r-4.5)
MsBackendMsp_1.15.1.tgz(r-4.6-any)MsBackendMsp_1.15.1.tgz(r-4.5-any)
MsBackendMsp_1.15.1.tar.gz(r-4.7-any)MsBackendMsp_1.15.1.tar.gz(r-4.6-any)
MsBackendMsp_1.15.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MsBackendMsp/json (API)
NEWS

# Install 'MsBackendMsp' in R:

install.packages('MsBackendMsp', repos = c('https://rformassspectrometry.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/msbackendmsp/issues

On BioConductor:MsBackendMsp-1.17.0(bioc 3.24)MsBackendMsp-1.16.0(bioc 3.23)

infrastructure proteomics massspectrometry metabolomics dataimport mass-spectrometry

6.44 score 5 stars 2 packages 46 scripts 5 exports 23 dependencies

Last updated from:506e13ce81. Checks:9 OK. Indexed: no.

Target	Result	Time
linux-devel-x86_64	OK	194
source / vignettes	OK	218
linux-release-x86_64	OK	191
macos-release-arm64	OK	137
macos-oldrel-arm64	OK	97
windows-devel	OK	151
windows-release	OK	136
windows-oldrel	OK	127
wasm-release	OK	140

Exports:backendInitialize export MsBackendMsp readMsp spectraVariableMapping

Dependencies:BH BiocGenerics BiocParallel clue cluster codetools cpp11 data.table formatR fs futile.logger futile.options generics IRanges lambda.r MASS MetaboCoreUtils MsCoreUtils ProtGenerics Rcpp S4Vectors snow Spectra

MsBackendMsp

Rendered fromMsBackendMsp.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2024-04-04
Started: 2022-02-02

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
MS data backend for msp files	backendInitialize,MsBackendMsp-method export,MsBackendMsp-method MsBackendMsp MsBackendMsp-class spectraVariableMapping,MsBackendMsp-method
Reading MSP files	readMsp