Package: MsBackendMgf 1.19.1

RforMassSpectrometry Package Maintainer

MsBackendMgf: Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files

Mass spectrometry (MS) data backend supporting import and export of MS/MS spectra data from Mascot Generic Format (mgf) files. Objects defined in this package are supposed to be used with the Spectra Bioconductor package. This package thus adds mgf file support to the Spectra package.

Authors:RforMassSpectrometry Package Maintainer [cre], Laurent Gatto [aut], Johannes Rainer [aut], Sebastian Gibb [aut], Michael Witting [ctb], Adriano Rutz [ctb], Corey Broeckling [ctb]

MsBackendMgf_1.19.1.tar.gz
MsBackendMgf_1.19.1.zip(r-4.7)MsBackendMgf_1.19.1.zip(r-4.6)MsBackendMgf_1.19.1.zip(r-4.5)
MsBackendMgf_1.19.1.tgz(r-4.6-any)MsBackendMgf_1.19.1.tgz(r-4.5-any)
MsBackendMgf_1.19.1.tar.gz(r-4.7-any)MsBackendMgf_1.19.1.tar.gz(r-4.6-any)
MsBackendMgf_1.19.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MsBackendMgf/json (API)

# Install 'MsBackendMgf' in R:
install.packages('MsBackendMgf', repos = c('https://rformassspectrometry.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/msbackendmgf/issues

On BioConductor:MsBackendMgf-1.21.0(bioc 3.24)MsBackendMgf-1.20.0(bioc 3.23)

infrastructureproteomicsmassspectrometrymetabolomicsdataimport

7.17 score 5 stars 2 packages 98 scripts 7 exports 23 dependencies

Last updated from:213d796c63. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK188
source / vignettesOK226
linux-release-x86_64OK188
macos-release-arm64OK146
macos-oldrel-arm64OK100
windows-develOK149
windows-releaseOK168
windows-oldrelOK140
wasm-releaseOK130

Exports:backendInitializeexportMsBackendAnnotatedMgfMsBackendMgfreadMgfreadMgfSplitspectraVariableMapping

Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11data.tableformatRfsfutile.loggerfutile.optionsgenericsIRangeslambda.rMASSMetaboCoreUtilsMsCoreUtilsProtGenericsRcppS4VectorssnowSpectra

Description and usage of MsBackendMgf

Rendered fromMsBackendMgf.Rmdusingknitr::rmarkdownon Jun 03 2026.

Last update: 2025-04-07
Started: 2020-04-16

Readme and manuals

Help Manual

Help pageTopics
MS data backend for MGF filesbackendInitialize,MsBackendAnnotatedMgf-method backendInitialize,MsBackendMgf-method export,MsBackendMgf-method MsBackendAnnotatedMgf MsBackendMgf MsBackendMgf-class spectraVariableMapping,MsBackendMgf-method
Reading MGF filesreadMgf readMgfSplit