Package: SpectriPy 0.1.1
SpectriPy: Integrating Spectra with Python's matchms
The SpectriPy package allows integration of Python-based MS analysis code with the Spectra package. Spectra objects can be converted into Python's matchms Spectrum objects. In addition, SpectriPy integrates and wraps the similarity scoring functions from the matchms package into R.
Authors:
SpectriPy_0.1.1.tar.gz
SpectriPy_0.1.1.zip(r-4.5)SpectriPy_0.1.1.zip(r-4.4)SpectriPy_0.1.1.zip(r-4.3)
SpectriPy_0.1.1.tgz(r-4.4-any)SpectriPy_0.1.1.tgz(r-4.3-any)
SpectriPy_0.1.1.tar.gz(r-4.5-noble)SpectriPy_0.1.1.tar.gz(r-4.4-noble)
SpectriPy_0.1.1.tgz(r-4.4-emscripten)SpectriPy_0.1.1.tgz(r-4.3-emscripten)
SpectriPy.pdf |SpectriPy.html✨
SpectriPy/json (API)
NEWS
# Install 'SpectriPy' in R: |
install.packages('SpectriPy', repos = c('https://rformassspectrometry.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rformassspectrometry/spectripy/issues
infrastructuremass-spectrometrypython
Last updated 1 years agofrom:08c696d222. Checks:OK: 1 ERROR: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 31 2024 |
R-4.5-win | ERROR | Aug 31 2024 |
R-4.5-linux | ERROR | Aug 31 2024 |
R-4.4-win | ERROR | Aug 31 2024 |
R-4.4-mac | ERROR | Aug 31 2024 |
R-4.3-win | ERROR | Aug 31 2024 |
R-4.3-mac | ERROR | Aug 31 2024 |
Exports:compareSpectriPyCosineGreedyParamCosineHungarianParamModifiedCosineParampyspec_to_rspecrspec_to_pyspecspectraVariableMapping
Dependencies:basiliskbasilisk.utilsBHBiocGenericsBiocParallelclueclustercodetoolscpp11dir.expiryfilelockformatRfsfutile.loggerfutile.optionshereIRangesjsonlitelambda.rlatticeMASSMatrixMetaboCoreUtilsMsCoreUtilspngProtGenericsrappdirsRcppRcppTOMLreticulaterlangrprojrootS4VectorssnowSpectrawithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Spectra similarity calculations using matchms | compareSpectriPy compareSpectriPy,Spectra,missing,CosineGreedyParam-method compareSpectriPy,Spectra,Spectra,CosineGreedyParam-method CosineGreedyParam CosineHungarianParam ModifiedCosineParam |
Low level functions to convert between Spectra and matchms Spectrum | pyspec_to_rspec rspec_to_pyspec spectraVariableMapping,missing-method |