NEWS

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MsDataHub 1.11.5

• Fix metadata

MsDataHub 1.11.4

• Add DDA and DIA proteomics data to illustrate QFeatures::readQFeatures().
• Various fixes.

MsDataHub 1.11.3

• Add Boekweg et al. (2022) SCP and bulk mzML files, and Sage identification TSV files (see ?Boekweg2022)
• Added Guillaume Deflandre as contributor.

MsDataHub 1.11.2

• Add MS3TMT data files.

MsDataHub 1.11.1

• Add CE-MS test data files (see PR #11).
• Add description of the data sets to the package vignette.

MsDataHub 1.11

MsDataHub 1.7

MsDataHub 1.7.4

• Fix documentation.

MsDataHub 1.7.3

• Add cRAP contaminant databases.

MsDataHub 1.7.2

• Fix space in latest resource URLs.

MsDataHub 1.7.1

• DIA-NN report files from Ai et al (2025) for adult and iPSC-derived cardiomyocytes single-cell proteomics data.

MsDataHub 1.3

MsDataHub 1.3.4

• Update vignette: load Report.Derks2022.plexDIA.tsv and benchmarkingDIA.tsv with latest QFeatures.

MsDataHub 1.3.3

• Add Report.Derks2022.plexDIA.tsv, plexDIA DIA-NN output from Derks et al. (2022).

MsDataHub 1.3.2

• Fix path to benchmarkingDIA.tsv on zenodo.

MsDataHub 1.3.1

• Add benchmarkingDIA.tsv data, contributed by Kristina Gomoryova.

MsDataHub 1.0

MsDataHub 1.0.0

• First official stable release.

MsDataHub 0.99

MsDataHub 0.99.3

• Updates based on package review (see https://github.com/Bioconductor/Contributions/issues/2887#issuecomment-1463655683).

MsDataHub 0.99.2

• Fix title names with make.names() to assert that they will represent valid function names after running ExperimentHub::createHubAccessors().
• Execute chunks in vignette.

MsDataHub 0.99.1

• Run createHubAccessors() when loading the package.

MsDataHub 0.99.0

• Package submission to Biocoductor.