Package: MetaboCoreUtils 1.13.1

Johannes Rainer

MetaboCoreUtils: Core Utils for Metabolomics Data

MetaboCoreUtils defines metabolomics-related core functionality provided as low-level functions to allow a data structure-independent usage across various R packages. This includes functions to calculate between ion (adduct) and compound mass-to-charge ratios and masses or functions to work with chemical formulas. The package provides also a set of adduct definitions and information on some commercially available internal standard mixes commonly used in MS experiments.

Authors:Johannes Rainer [aut, cre], Michael Witting [aut], Andrea Vicini [aut], Liesa Salzer [ctb], Sebastian Gibb [aut], Michael Stravs [ctb], Roger Gine [aut], Philippine Louail [aut]

MetaboCoreUtils_1.13.1.tar.gz
MetaboCoreUtils_1.13.1.zip(r-4.5)MetaboCoreUtils_1.13.1.zip(r-4.4)MetaboCoreUtils_1.13.1.zip(r-4.3)
MetaboCoreUtils_1.13.1.tgz(r-4.5-any)MetaboCoreUtils_1.13.1.tgz(r-4.4-any)MetaboCoreUtils_1.13.1.tgz(r-4.3-any)
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MetaboCoreUtils.pdf |MetaboCoreUtils.html✨
MetaboCoreUtils/json (API)
NEWS

# Install 'MetaboCoreUtils' in R:
install.packages('MetaboCoreUtils', repos = c('https://rformassspectrometry.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/rformassspectrometry/metabocoreutils/issues

On BioConductor:MetaboCoreUtils-1.15.0(bioc 3.21)MetaboCoreUtils-1.14.0(bioc 3.20)

infrastructuremetabolomicsmassspectrometrymass-spectrometry

8.93 score 9 stars 36 packages 58 scripts 34 exports 17 dependencies

Last updated 6 months agofrom:fa030f1789. Checks:5 OK, 3 NOTE. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKFeb 24 2025
R-4.5-winNOTEFeb 24 2025
R-4.5-macNOTEFeb 24 2025
R-4.5-linuxNOTEFeb 24 2025
R-4.4-winOKFeb 24 2025
R-4.4-macOKFeb 24 2025
R-4.3-winOKFeb 24 2025
R-4.3-macOKFeb 24 2025

Exports:addElementsadductFormulaadductNamesadductsadjust_lmcalculateKmcalculateKmdcalculateMasscalculateRkmdcontainsElementsconvertMtimecorrectRindexcountElementsfit_lmformula2mzindexRtimeinternalStandardMixNamesinternalStandardsisotopicSubstitutionMatrixisotopologuesisRkmdmass2mzmclosestmultiplyElementsmz2masspasteElementspercentMissingrowBlankrowDratiorowPercentMissingrowRsdrsdstandardizeFormulasubtractElements

Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11formatRfutile.loggerfutile.optionsgenericslambda.rMASSMsCoreUtilsRcppS4Vectorssnow

Core Utils for Metabolomics Data

Rendered fromMetaboCoreUtils.Rmdusingknitr::rmarkdownon Feb 24 2025.

Last update: 2024-04-13
Started: 2021-01-25