Package: Chromatograms 0.1.0

Philippine Louail

Chromatograms: Infrastructure for Chromatographic Mass Spectrometry Data

The Chromatograms packages defines a efficient infrastructure for storing and handling of chromatographic mass spectrometry data. It provides different implementations of *backends* to store and represent the data. Such backends can be optimized for small memory footprint or fast data access/processing. A lazy evaluation queue and chunk-wise processing capabilities ensure efficient analysis of also very large data sets.

Authors:Laurent Gatto [aut], Johannes Rainer [aut], Philippine Louail [aut, cre]

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Chromatograms.pdf |Chromatograms.html✨
Chromatograms/json (API)

Peer review:

Bug tracker:https://github.com/rformassspectrometry/chromatograms/issues

On CRAN:

50 exports 1 stars 0.71 score 9 dependencies 1 scripts

Last updated 16 days agofrom:68a9966c2f. Checks:OK: 1 WARNING: 6. Indexed: yes.

Exports:backendInitializebackendMergebackendParallelFactorchromDatachromData<-chromIndexchromIndex<-chromVariablescollisionEnergycollisionEnergy<-coreChromVariablescorePeaksVariablesdataOrigindataOrigin<-dataStoragedataStorage<-fillCoreChromVariablesintensityintensity<-isEmptyisReadOnlymsLevelmsLevel<-mzmz<-mzMaxmzMax<-mzMinmzMin<-peaksDatapeaksData<-precursorMzprecursorMz<-precursorMzMaxprecursorMzMax<-precursorMzMinprecursorMzMin<-productMzproductMz<-productMzMaxproductMzMax<-productMzMinproductMzMin<-resetrtimertime<-selectChromVariablessplitvalidChromDatavalidPeaksData

Dependencies:BiocGenericsclueclusterIRangesMASSMsCoreUtilsProtGenericsRcppS4Vectors